| McWILLIAMS SEMINAR ARCHIVE |
|
| Date |
Speaker |
Advisor |
Topic |
|
| 12/4/2024 |
John D'Amore, MS '11 |
Elmer Bernstam, MD |
Interoperability & Informatics: the Peanut Butter and Jelly of Health IT |
|
| 11/27/2024 |
Hao Xubing / Warren Manuel |
Licong Cui, PhD |
Vocabulary alignment in the UMLS / Standardization and Harmonization of Vaccine Vocabularies for Real-World data-based Vaccine Research - View Seminar |
|
| 11/20/2024 |
Yifang Dang / Zehan (Leo) Li |
Licong Cui, PhD / Hongfang Liu, PhD |
Social Determinants of Health Ontology / Explainable Multi-label Classification of Suicidal Tendencies from Psychiatric Evaluation Notes Using Large Language Models - View Seminar |
|
| 11/13/2024 |
Shikha Tripathi / Apollo McOwiti |
Luca Giancardo, PhD / Laila Bekhet, PhD |
Disease-Specific Self-Supervised Learning with Keystroke Dynamics and Neuroimaging / Determination of Unwarranted Clinical Variation Risk at the Clinic Level for Children being Treated for Acute Viral Pharyngitis at an Academic Clinic - View Seminar |
|
| 11/6/2024 |
Dulin Wang / Rongbin Li |
Wenjin (Jim) Zheng, PhD / Xiaoqian Jiang, PhD |
Applications of named entity extraction in healthcare / Employ Large Language Model for Novel Gene Set Annotation - View Seminar |
|
| 10/30/2024 |
Wentao Li / Alan Pan |
Xiaobo Zhou, PhD / Yejin Kim, PhD |
From Genes to Brain: A spatial Genome-Wide Association Study method that decodes the genomic data with spatial information / Variability in 1-Year Home Time among Acute Ischemic Stroke Survivors: Analysis of Clinical and Claims Linked Data using Clustering Techniques and Ensemble Learning - View Seminar |
|
| 10/23/2024 |
Amy Franklin, PhD & Dean Jiajie Zhang, PhD |
|
Celebrating McWilliams Day |
|
| 10/16/2024 |
Jennifer Blumenthal-Barby, PhD |
Elmer Bernstam, MD |
Decision Making, Risk, and AI: Ethical Considerations |
|
| 10/9/2024 |
Jeremy Hill, DO |
Peter Killoran, MD /Elmer Bernstam, MD |
A Standard for Physician Scheduling - View Seminar Link |
|
| 10/2/2024 |
Yan Hu / Yaobin Ling |
Xiaoqian Jiang, PhD |
Improving Large Language Models for Clinical Named Entity Recognition via Prompt Engineering / MALLM-GAN: Multi-Agent Large Language Model as Generative Adversarial Network for Synthesizing Tabular Data”. - View Seminar Link |
|
| 9/25/2024 |
Bingyu Mao / Sheikh Muhammad Saiful Islam |
Degui Zhi, PhD |
Benchmarking Disease Prediction: Prompted/Fine-tuned Large Language Models vs. Structured EHR Clinical Foundation Model / Enhanced Genetic Insights from Brain Region-Specific GWAS Using Deep Unsupervised Learning Derived Endophenotypes on UK Biobank T1-Weighted MRI Data - View Seminar Link |
|
| 9/18/2024 |
Yiming Li / Jianping He |
Licong Cui, PhD / Degui Zhi, PhD |
RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization / Advancing Pancreatic Cancer Prediction with a Next Visit Token Prediction Head on top of Med-BERT - View Seminar Link |
|
| 9/11/2024 |
Jiaqi Gu, PhD |
Elmer Bernstam, MD |
Supporting care transitions: From ICU to general medical teams |
|
| 9/4/2024 |
Joshua Lin, MD, ScD |
Elmer Bernstam, MD |
Combining unstructured EHR with claims data for high-dimensional proxy confounding adjustment in comparative effectiveness research |
|
| 8/28/2024 |
Andy Draper, PhD / Dean Sittig, PhD |
Dean Sittig, PhD |
|
|
| 12/06/2023 |
Meera Subash, MD |
|
Patient Perceptions of e-Visits: Qualitative Study of Older Adults to Inform Health System Implementation |
|
| 11/29/2023 |
Jeremy Hill, DO |
|
Research Seminar |
|
| 11/22/2023 |
No Seminar |
THANKSGIVING BREAK |
|
|
| 11/15/2023 |
Two presenters |
|
Yanfei Wang - Estimating Individual Treatment Effect for COVID-19 patients
Yan Chu - Machine Learning Model Guided Intensity-Modulated Proton Therapy Plan Optimization for the Mitigation of Radiation-Induced
Click to view seminar |
|
| 11/08/2023 |
Two presenters |
|
Bingyu Mao - A deep-learning-based two-compartment predictive model (PKRNN-2CM) for vancomycin therapeutic drug monitoring
Sheikh Muhammad Saiful Islam - New phenotype discovery method by unsupervised deep
Click to view seminar |
|
| 11/01/2023 |
Two presenters |
|
Yiming Li - Temporal and Spatial Analysis of COVID-19 Vaccines Using Reports from Vaccine Adverse Event Reporting System
Zehan Li - Improving Psychiatry Treatment Responses Prediction with Natural Language
Click to view seminar |
|
| 10/25/2023 |
Ross Koppel, PhD |
|
Cyber Security for Healthcare Records |
|
| 10/18/2023 |
Two presenters |
|
Morgan Foreman - Improving Patient Activation with Digital Solutions: Supporting Black Pregnant Women with Hypertensive Disorders of Pregnancy
Tongtong Huang - Infer Granger Causality from Pseudo Time-series of Rodent
Click to view seminar |
|
| 10/11/2023 |
Two presenters |
|
Rongbin Li - Large Language Models in Drug Combination Prediction
Dulin Wang - Deep Clustering Models in AD Subtyping
Click to view seminar |
|
| 10/04/2023 |
Two presenters |
|
Xubing Hao - Identification of potential missing concepts in SNOMED CT
Yumeng Yang - Text Classification of Cancer Clinical Trial Eligibility Criteria
Click to view seminar |
|
| 09/27/2023 |
Two presenters |
|
Ishav Desai -Classifying scanned documents using machine learning
Xu Zuo - Extracting Systemic Anti-Cancer and Response Information from the Clinical Notes Following the RECIST Definition
Click to view seminar |
|
| 09/20/2023 |
Kuldeep Kumar, PhD |
|
Some Issues in Classification Problem with Application in Cancer Detection |
|
| 09/13/2023 |
Albert Montillo, PhD |
|
Bridging the Gap: Harnessing innovations in Deep Learning to provide new insights and prediction capabilities from Complex Biomedical Data |
|
| 09/06/2023 |
Heather Lyu, MD |
|
Better Data, Better Outcomes: How to Realize the Value of Big Data in Surgical Oncology |
|
| 08/30/2023 |
Jeritt Thayer |
|
Past, present, and (potential) future of CDS malfunctions |
|
| 04/26/2023 |
Jiajie Zhang |
|
State of the School |
|
| 04/19/2023 |
Yuntao Yang |
|
Discover protein structural features of alternative splicing and isoforms using AlphaFold 2 |
|
| 04/12/2023 |
Peter Killoran, Ryan Walsh |
|
Transition to Epic at Memorial Hermann Hospital System |
|
| 04/05/2023 |
Zhao Li |
|
Recognize Biomedical Knowledge from Publications from Named Entity Recognition to Relation Extraction" |
|
| 03/29/2023 |
Eric Bergh |
|
Fetal EHR |
|
| 03/22/2023 |
Wentao Li |
|
Privacy is all you need: privacy and security in Genome-Wide Association Studies |
|
| 03/15/2023 |
No Seminar |
SPRING BREAK |
|
|
| 03/08/2023 |
Yifang Dang |
|
Extracting and standardizing social determinants of health factors |
|
| 03/01/2023 |
Morgan Foreman |
|
Improving Patient Activation with Digital Solutions: Supporting Black Pregnant Women with Hypertensive Disorders |
|
| 02/22/2023 |
Yan Chu |
|
Forecasting Lymphocytes Depletion during Radiotherapy using Time Series Transformers |
|
| 02/15/2023 |
Clifton "Dave" Fuller |
|
Imaging, informatics and radiation oncology |
|
| 02/08/2023 |
Yanfei Wang / Bingrui Li |
|
Scaling up the Bayesian GPLVM to uncover clinical staging / Investigate the composition changes of cells and exosomes in the tumor microenvironment by novel deconvolution approach |
|
| 02/01/2023 |
Zhiyu Wan |
|
Strategic Privacy-Preserving Sharing of High Dimensional Biomedical Data Enabled by Artificial Intelligence |
|
| 01/25/2023 |
Jianping He |
|
Applying prompt tuning in biomedical relation extraction |
|
| 01/18/2023 |
Michael Jacobs |
|
Computational Radiology: A New Frontier in Integrated Medicine with Radiomics, Machine, and Deep Learning |
|
| 01/11/2023 |
David Hanauer |
|
EMERSE: an easy-to-use, self-service, free-text EHR search engine for cohort identification, chart reviews, and more |
|
| 12/07/2022 |
Ying Ding |
|
Drug Discovery, PubMed, and Clinical Trial |
|
| 11/30/2022 |
Shaun Grannis |
|
Leveraging Health Information, Exchange to Support Population Health and Advanced Analytics: The Indiana Experience |
|
| 11/23/2022 |
|
Thanksgiving Break |
|
|
| 11/16/2022 |
Jeritt Thayer |
|
Improving Health System Integration by Uncovering Health Data Attributes |
|
| 11/09/2022 |
Ivan Coronado /
Yuntao Yang |
|
Proxy Analysis of Neural Vascular System using Retina Imaging and Deep Neural Networks / AlphaFold 2: applications and deployment in an HPC environment |
|
| 11/02/2022 |
Xiaoxuan Cai |
|
Causal inference for multivariate time series in the application of mobile health |
|
| 10/26/2022 |
Jingqi Wang /
Nina Smith |
|
Medical concept normalization using transformers - from string similarity to semantic similarity / Qualitative Research Methods to Study Unintended Consequences of Health Information Technology Policy |
|
| 10/19/2022 |
Pora Kim |
|
FusionPDB: Fusion Protein Annotation Database |
|
| 10/11/2022 |
Charles Friedman |
|
10/11 (At SBMI) and 10/12 (at Dental School) Chuck Friedman |
|
| 10/05/2022 |
Hussein Abbas |
|
Dissecting Acute Myeloid Leukemia and its Microenvironment, One Cell at a Time |
|
| 09/28/2022 |
Todd Johnson |
|
Causal inference from observational data |
|
| 09/21/2022 |
Josh Lin |
|
Data leakage due to care provided outside of the study electronic health record system: potential biases and solutions |
|
| 09/14/2022 |
Zachary Siegel |
|
In a world of Stigma, Can a Computer Algorithm Really Predict Overdose Risk? |
|
| 09/07/2022 |
Russ Waitman/GPC |
|
PCORNet GPC |
|
| 08/31/2022 |
Stephen Wu |
|
Honor Ethics: The Challenge of Globalizing Value Alignment in AI Ethics |
|
| 04/27/2022 |
Jiajie Zhang |
|
State of the School |
|
| 04/20/2022 |
Alexandra Zingg Guzman |
|
Towards Digital Health Interventions for Perinatal Mental Health Promotion: Lessons Learned from Social Media Listening |
|
| 04/13/2022 |
Chunhua Weng |
|
Natural Language Cohort Query at the intersection of AI and HCI |
|
| 04/06/2022 |
Carlos Perez Aldana |
|
Social Network Analysis of Online Support Communities for Adolescent and Young Adult Cancer Survivors |
|
| 03/30/2022 |
Bingrui Li |
|
Investigate the composition changes of tumor microenvironment in various cancers by novel deconvolution approach |
|
| 03/23/2022 |
Sarah May |
|
Using Data Science Methods to Facilitate HIV Prevention |
|
| 03/16/2022 |
|
Spring Break |
|
|
| 03/09/2022 |
Zhao Li / Xu Zuo |
|
Data bias and the performance of deep learning for predicting HCC development among NAFLD patients / An informatics framework for representing, detecting and measuring citations of biomedical datasets |
|
| 03/02/2022 |
Alex Turchin |
|
Using EHR Data for Clinical Research |
|
| 02/23/2022 |
Karthik Adapa |
TBA |
|
|
| 02/16/2022 |
Wejnin (Jim) Zheng |
|
Data Science and Informatics Core for Cancer Research (DSICCR): Resources, Expertise and Services |
|
| 02/09/2022 |
Griffin Weber |
|
Leveraging electronic health records across multiple institutions for research |
|
| 02/02/2022 |
Yandong Jiang |
|
AI and Anesthesia: how quickly is the field moving forwards? |
|
| 01/26/2022 |
Hussein Abbas |
|
Investigating Acute Myeloid Leukemia: From Clinical Studies to Multi-Omic Single Cell Profiling |
|
| 01/19/2022 |
Yu-Chiao (Chris) Chiu |
|
Deep learning for predicting the response to chemical and genetic perturbations of cancer |
|
| 01/12/2022 |
Xia Ning |
|
Ranking-based Artificial Intelligence: from clinical decision support to precision medicine |
|
| 12/08/2021 |
Neil Abernathy |
|
How informatics accelerated the COVID-19 vaccine clinical trials |
|
| 12/01/2021 |
Zak Kohane |
|
Learning how to unravel complex disease using phenome-wide scans + genomics: Autism Case History |
|
| 11/24/2021 |
|
Thanksgiving Break |
|
|
| 11/17/2021 |
Jingqi Wang / Xinyuan Zhang |
|
Medical concept normalization on clinical text / Computer-Aided Supporting Algorithm for Skin Diseases Diagnosis |
|
| 11/10/2021 |
Sarah May |
|
Predicting risk of HIV infection using EHR data |
|
| 11/03/2021 |
Yanfei Wang |
|
Approach to characterize disease progression |
|
| 10/27/2021 |
Yuqi Si |
|
Deep Representation Learning to Enhance Clinical Narrative Understanding |
|
| 10/20/2021 |
Tongtong Huang / Ivan Coronado |
|
Drug adverse event prediction using knowledge graph / Towards Stroke Biomarkers on Fundus Retinal Imaging |
|
| 10/13/2021 |
Pora Kim |
|
FusionGDB 2.0, fusion gene annotation update aided by deep learning |
|
| 10/06/2021 |
Ang Li |
|
Optimizing Cancer Associated Thrombosis Research through Clinical Informatics & EpidemiologyD |
|
| 09/29/2021 |
Laila Bekhet |
|
Towards implementable deep learning based predictive models |
|
| 09/22/2021 |
Jia Zeng |
|
Utilizing Informatics in Precision Oncology Decision Support |
|
| 09/15/2021 |
Christoph Lehmann |
|
International Status of Medical Informatics |
|
| 09/08/2021 |
Sahiti Myneni |
|
Towards sustainable digital health ecosystem: convergence of social computing, mHealth and human factors |
|
| 09/01/2021 |
Robert Murphy |
|
UT Health Intelligence Platform (UT-HIP) |
|
| 04/28/2021 |
Jiajie Zhang |
|
State of the School |
|
| 04/21/2021 |
Alexandra Zingg / Tavleen Singh |
|
Formulating Digital Health Technologies for Peripartum Depression Management: A Mixed Methods Inquiry / A qualitative inquiry of speech acts in health-related online peer interaction |
|
| 04/14/2021 |
Yi-Ching Tang |
|
Predicting Drug Response and Synergy Using Deep Learning Models |
|
| 04/07/2021 |
Roni Matin |
|
Anchoring Bias in Clinical Decision-Making Involving Transitions of Care in the Emergency Department: Identification and Evaluation of Risk Factors |
|
| 03/31/2021 |
Nina Smith |
|
Unintended consequences of HIT policy: The case of the Texas prescription drug monitoring program |
|
| 03/24/2021 |
Sarvesh Soni |
|
Questioning and Answering from Electronic Health Records |
|
| 03/17/2021 |
|
Spring Break - No Seminar |
|
|
| 03/10/2021 |
Jian Tang |
|
Graph representation learning for drug discovery |
|
| 03/03/2021 |
Laila Bekhet / Xiao Dong |
|
Comprehensive characterization of COVID-19 patients with test re-positivity in a large EHR system across the US |
|
| 02/24/2021 |
Linda Li |
|
Predictive algorithm for forecasting laboratory values |
|
| 02/17/2021 |
Babatope Fatuyi |
|
TBD |
|
| 02/10/2021 |
Gretchen Purcell Jackson |
|
A Framework for Evaluation of AI in Healthcare |
|
| 02/03/2021 |
Dina Demner-Fushman |
|
Deciphering consumers' health-related questions (including COVID-19) and finding reliable answers |
|
| 01/27/2021 |
Sunil Sheth |
|
Machine learning in Clinical Practice: Applications in Acute Stroke |
|
| 01/20/2021 |
Dean Sittig |
|
A Sociotechnical Framework for Safety-related EHR Research Reporting: The SAFER Reporting Framework |
|
| 01/13/2021 |
Luca Giancardo |
|
Introduction to Fully Convolutional Neural Networks for Medical Imaging |
|
| 12/09/2020 |
Surabhi Datta/Jingqi Wang |
|
Spatial Information Extraction from Radiology Reports / Concept Normalization for Biomedical Text |
|
| 12/02/2020 |
Sarvesh Soni/ Roni Matin |
|
Question Answering from Electronic Health Records / Identifying the Risks for Anchoring Bias during Emergency Department Transitions of Care |
|
| 11/25/2020 |
|
Thanksgiving Break |
|
|
| 11/18/2020 |
Xinyuan Zhang |
|
Ontological Computer-aided Diagnosis for Skin Diseases |
|
| 11/18/2020 |
Xiao Dong |
|
COVID-19 TestNorm - A Tool to Normalize COVID-19 Testing Names to LOINC Codes |
|
| 11/11/2020 |
Amy Franklin, et al. |
|
COVID-19 Panel |
|
| 11/04/2020 |
Yi-Ching Tang |
|
Explainable Drug Sensitivity Prediction through Cancer Pathway Enrichment Scores |
|
| 10/28/2020 |
Rebecca Lunstroth / Susan Fenton |
|
AI Ethics |
|
| 10/21/2020 |
Maryam Garza |
|
Determining the Utility of HL7® Fast Healthcare Interoperability Resources (FHIR®) Standards in Supporting EHR and EDC-agnostic eSource Implementations for Clinical Research |
|
| 10/14/2020 |
Harold Thimbleby |
|
Digital Theater / Calling out seductive digital systems that don't work when they hit reality |
|
| 10/07/2020 |
Yuqi Si |
|
Patient Representation Learning to Enhance Clinical Decision Support |
|
| 09/30/2020 |
Mary Boland |
|
Developing Informatics Methods to Study Maternal and Child Health Outcomes and their Environmental Contributions |
|
| 09/23/2020 |
Harold Lehmann |
|
Data and Software Quality in the National COVID Cohort Collaborative |
|
| 09/16/2020 |
Laila Gindy Bekhet |
|
Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease prediction |
|
| 09/09/2020 |
Hashim Al-Mubaid |
|
Gene mutation disease relationship and functional characterization with computational methods |
|
| 09/02/2020 |
James Lewis |
|
Perceived Usability: Usefulness and measurement |
|
| 04/22/2020 |
Maryam Garza |
|
HL7 Fast Healthcare Interoperability Resources (FHIR):Standardized Health Information Exchange for Streamlining Data Collection in Multi-Site Clinical Research Studies |
|
| 04/15/2020 |
Jiajie Zhang |
|
State of the School |
|
| 04/08/2020 |
Carlos Perez-Aldana/Laila Gindy Bekhet |
|
Social Network Analysis of Online Communities for Adolescent and Young Adult Cancer Survivors |
|
| 04/01/2020 |
Yuqi Si/Surabhi Datta |
|
Patient Representation Learning from EHRs: Challenges and Methods |
|
| 03/25/2020 |
Wei Zhang |
|
Mathematical network approaches enhance understanding of brain architecture of pediatric epilepsy *Note: Audio Issues Prevented Recording* |
|
| 03/18/2020 |
|
SPRING BREAK |
|
|
| 03/11/2020 |
Muhammad Amith |
|
An ontology driven dialogue manager for supporting HPV vaccine counseling |
|
| 03/04/2020 |
GQ Zhang |
|
Clinical Research Informatics in Action: a Data Science Perspective |
|
| 02/26/2020 |
Sarah May |
|
Developing Models to Predict Risk of HIV Infection Using Electronic Health Record Data |
|
| 02/19/2020 |
Thomas Deserno |
|
Accident and emergency informatics |
|
| 02/12/2020 |
Licong Cui |
|
Finding Needles in a Haystack: Debugging Large Biomedical Ontologies to Identify Hierarchical Defects |
|
| 02/05/2020 |
Tim Miller |
|
Clinical Natural Language Processing with Machine Learning |
|
| 01/29/2020 |
Michael Smolensky |
|
Biological Time: Often Neglected Variable in Bioinformatics |
|
| 01/22/2020 |
Elmer V. Bernstam |
|
Precision oncology from an informatics perspective |
|
| 01/15/2020 |
Health Goodrum |
|
Automatic Classification of Scanned Electronic Health Record Documents |
|
| 01/08/2020 |
Peter Hanik |
|
On the Nature of Problems and Solutions |
|
| 12/04/2019 |
Roni Matin |
|
Identifying Risk Factors for Anchoring Bias for Clinical Diagnoses Involving ED Sign-Outs |
|
| 11/27/2019 |
|
No Seminar - Thanksgiving Week |
|
|
| 11/20/2019 |
Alexandra Zingg Guzman |
|
Digital Health Systems in Maternal Mental Health: A Qualitative Assessment of Patient Needs and Views |
|
| 11/13/2019 |
Fatima Merchant |
|
Computational modeling tools to facilitate shared decision making in breast reconstruction surgery |
|
| 11/06/2019 |
Carlos Perez Aldana |
|
Harnessing Online Social Networks for Interventions Targeting Adolescent and Young Adult (AYA) Cancer Survivors |
|
| 10/30/2019 |
Leslie Lenert |
|
Desiderata for a Learning Health System |
|
| 10/23/2019 |
Thamar Solorio |
|
Named Entity Recognition in Challenging Scenarios |
|
| 10/16/2019 |
Nina Smith |
|
The US Opioid Crisis and Prescription Drug Monitoring: Biomedical Informatics Research Needs |
|
| 10/02/2019 |
Maryam Garza |
|
Evaluating the Coverage of the HL7 FHIR Standard to Support eSource Data Exchange Implementations for use in Multi-Site Clinical Research Studies |
|
| 09/25/2019 |
Steve Jones (tentative) |
TBA |
|
|
| 09/18/2019 |
Lance Black |
|
TMC Innovation |
|
| 09/11/2019 |
Xiao Dong |
|
Detecting Cancer Preventive Effects of Non-Cancer Drugs Using Real World Data |
|
| 09/04/2019 |
Todd Johnson |
|
Causal reasoning in biomedicine |
|
| 08/28/2019 |
Lukas Simon |
|
Longitudinal analysis of lung regeneration at cellular resolution |
|
| 05/01/2019 |
Todd J. Treangen |
|
The Promise and Perils of Microbial Forensics in the Genomics Era |
|
| 04/24/2019 |
Qiang Wei/Jingcheng Du/Xinyuan Zhang |
|
Understanding Health Beliefs regarding HPV vaccine from Twitter / A Study of Deep Learning Approaches for Medication and Adverse Drug Event Extraction from Clinical Text / Automatic Computer-Aided Diagnosis Algorithm for Skin Disease Images |
|
| 04/17/2019 |
Henry Jones |
|
Bioinformatics Utilization Of (And Dependence On) Information Technologies: Understanding, Managing, and Risk-Mitigating The Contracting, Intellectual Property, and Other Legal Aspects Of Your Chosen Career Path |
|
| 04/10/2019 |
Navin Varadarajan |
|
Advancing cancer immunotherapy one cell at a time |
|
| 04/03/2019 |
Jiajie Zhang |
|
State of the School |
| 03/06/2019 |
Pat McGinnis |
|
Informatics as a tool for Health Insurance |
|
| 02/27/2019 |
Andrew Routh |
|
Nanopore sequencing and ClickSeq to characterize viral RNA recombination, mRNA splicing, and polyadenylation |
|
| 02/27/2019 |
Xia (Ben) Hu |
|
Human-Centric Machine Learning |
|
| 02/20/2019 |
|
Spring Break - No Seminar |
|
|
| 02/20/2019 |
Anirban Maitra |
|
Why is Pancreatic Cancer So Hard to Treat and What Can We Do About It? |
|
| 02/13/2019 |
Salavat Aglyamov |
|
Dynamic optical coherence elastography for various biomedical applications |
|
| 02/13/2019 |
Deevakar Rogith |
|
Computational ethnography: learning from EHR log data |
|
| 02/06/2019 |
Jose-Miguel Yamal |
|
Extensions of Statistical and Machine Learning Methods for Classification of Objects Based on Measurements of Embedded Observations within Each Object |
|
| 01/30/2019 |
David Mayerich |
|
Building High-Throughput Three-Dimensional Models of Tissue at the Cellular Level |
|
| 01/16/2019 |
Guoning Chen |
|
Examples of Graph-based Scientific Data Processing and Geometry Processing |
|
| 12/05/2018 |
Jiajie Zhang |
|
State of the School |
|
| 11/28/2018 |
Yejin Kim |
|
Tensor Factorization for Computational Phenotyping |
|
| 11/21/2018 |
|
Thanksgiving Week |
|
|
| 11/14/2018 |
Muhammad Amith |
|
Applications of Semantics and Knowledge Representation for Public Health Informatics Research |
| 11/07/2018 |
Philip W Bradley |
|
HIMSS Analytics – Maturity Model Benefits |
|
| 10/31/2018 |
Xiaoqian Jiang |
|
Calibrating Predictive Models for Clinical Decision Making - Distributed data analysis |
|
| 10/24/2018 |
Pora Kim |
|
FusionGDB: A Reference Resource of Functional Annotation of Human Fusion Genes |
|
| 10/17/2018 |
Akdes Harmanci |
|
Identifying Cancer Biomarkers using Integrative Analysis of Single Cell and Bulk Sequencing Data |
|
| 10/10/2018 |
Miran Kim |
|
Homomorphic Encryption for Protecting Genomic Privacy |
|
| 10/3/2018 |
W. Jim Zheng |
|
Promote Data Driven Research |
|
| 09/26/2018 |
Licong Cui |
|
Ontology Quality Assurance for Biomedical Data Science and Applications |
|
| 09/19/2018 |
Amelio Telenti |
|
The data of 150,000 human genomes |
|
| 09/12/2018 |
Ying Lin |
|
Large-Scale Personalized Health Surveillance by Collaborative Learning and Selective Sensing |
|
| 09/05/2018 |
Kang Hsieh (With Avi Raju, Bin Yao, Adeola Akinfaderin) |
|
Fraud Detection using Clustering Techniques, SBMIners win the MITRE Healthcare Anti-Fraud Academic Competition |
|
| 08/29/2018 |
Stephen Wu |
|
Patient Level Search in EHR Text |
|
| 05/06/2018 |
No Seminar |
Finals Week |
|
|
| 04/29/2018 |
Muhammad Amith / Barbara Berkovich |
|
Construction and Evaluation of a Vaccine Information Ontology for Patients / Use of a Custom Registry for Coumadin Management Across Inpatient and Ambulatory Settings |
|
| 04/22/2018 |
Stanley Yu / Katherine Pepper |
|
Improving Retrieval of PubMed Articles Using the TopicalMeSH Representation / Concept Map versus Mind Map: Contributions to a Conceptual Analysis of Social Network Analysis |
|
| 04/15/2018 |
Chen Liang / Min Jiang |
|
Knowledge representation for patient safety reports / Semantic Role Labeling of Clinical Text: comparing syntactic parsers and features |
|
| 04/08/2018 |
Guergana Savova |
|
Temporal Relation Discovery from the Clinical Narrative |
|
| 04/01/2018 |
Mia Markey |
|
3-D Modeling-based Decision Support for Optimizing Quality of Life following Breast Reconstruction |
|
| 03/18/2018 |
Lex Frieden |
|
Tips for Improving NIH Proposals |
|
| 03/11/2018 |
Vinod Vydiswaran |
|
Mining High-Qualtiy Health Information from Online Resources: The Role of Big Data Analytics |
|
| 03/07/2018 |
Joonha Chang |
|
Towards Intoxication Detection via non-invasive Natural Typing |
|
| 03/04/2018 |
Erez Lieberman Aiden |
|
How genomes fold: Now in the loop |
|
| 02/25/2018 |
Wei Zhao |
|
Molecular Characterization and Clinical implementation of Breast Cancer Genomics Using Massive Parallel Sequencing and Microarray |
|
| 02/18/2018 |
Kirsten Ostherr |
|
From Motion Pictures to Mobile EHRs: Using Technology to Communicate Medical Information |
|
| 02/11/2018 |
Sina Madani |
|
Use of Natural Language Processing in Enterprise Terminology Development |
|
| 02/04/2018 |
Hadley Wickham |
|
Pipelines for Data Analysis |
|
| 01/28/2018 |
Amber Johnson |
|
Information challenges in personalized cancer therapy |
|
| 12/6/2017 |
Carl Vartian |
|
Risks, Benefits and Safety of Hospital EHRs |
|
| 11/29/2017 |
Peter Killoran |
|
Implementation of an Anesthesia Information Management System – Lessons learned |
|
| 11/15/2017 |
Kenna Shaw |
|
Precision Cancer Medicine: Neither Silver Bullet Nor a Dream Illusion |
|
| 11/8/2017 |
Xiaobo Zhou |
|
Computational Systems Medicine: Look forward |
|
| 11/1/2017 |
Qiang Wei |
|
Reduction of annotation time for biomedical concepts extraction in practice |
|
| 10/25/2017 |
Nadir Weibel |
|
Sensing, Understanding, Intervening: Human-Centered and Ubiquitous Computing for Health |
|
| 10/18/2017 |
Safa Fathiamini |
|
Relational vs. Attributional Similarity as a Basis for the Identification of Drug-Gene Relationships |
|
| 10/11/2017 |
Henry Wang |
|
Prehospital Endotracheal Intubation: Leveraging Large Data to Advance Acute Care |
|
| 10/4/2017 |
Nick Navin |
|
Delineating Tumor Evolution with Single Cell Genomics |
|
| 9/27/2017 |
Hua Xu |
|
Toward portable NLP solutions for healthcare – the journey of CLAMP |
|
| 9/20/2017 |
Wendy Chapman |
|
NLP Out of the Box: How Close Are We? - Healthcare Transformation Needs NLP |
|
| 9/13/2017 |
William Paiva |
|
Transforming health care with health data analytics and predictive medicine - Center for Health Systems Innovation |
|
| 9/6/2017 |
Assaf Gottlieb |
|
Clinical and genetic-based patient profiles help compare and predict drug effects - Estimating effects of 2nd line therapy for T2DM using EHRs |
|
| 4/26/2017 |
Jiajie Zhang |
|
State of the School |
|
| 4/19/2017 |
Jun Li |
|
Clinical Trial Management System and Its Interoperability |
|
| 4/12/2017 |
Frank Manion |
|
Ontology Engineering: Soliciting and Validating Knowledge From Domain Experts |
|
| 4/5/2017 |
Mark Weiner |
|
Clinical Data Analytics Idiosyncrasies - Truth versus Truthiness in Clinical Data |
|
| 3/22/2017 |
Jingcheng Du |
|
Understanding Twitter contents on vaccinations using multiple machine learning based approaches |
|
| 3/8/2017 |
Qiang Wei |
|
Cost Model based Active Learning for Named Entity Recognition in Clinical Text |
|
| 3/1/2017 |
Devika Subramanian |
|
Computational Thinking |
|
| 2/15/2017 |
Luca Giancardo |
|
Detection of Motor Decline in Early Parkinson's Disease by Interaction with Digital Devices |
|
| 2/8/2017 |
Joydeep Ghosh |
|
Eliciting Actionable Insights from Complex Medical Data |
|
| 2/1/2017 |
Scott Malec |
|
Using Background Knowledge to Tame Clinical Observational Data, a Use Case in Pharmacovigilance |
|
| 1/25/2017 |
Hardeep Singh |
|
Improving Diagnosis in the EHR Era |
|
| 1/18/2017 |
Marc Overhage |
|
Instrumenting and learning from the patient, provider, system interaction |
|
| 1/11/2017 |
Genevera Allen |
|
Mixed Graphical Models with Applications to Integrative Cancer Genomics |
|
| 12/2/2016 |
Janet Wojcicki |
|
Leukocyte Telomere Length as Predictor of Metabolic Disease in Latinos |
|
| 11/30/2016 |
Scott Sittig |
|
capABILITY: A mHealth solution for Chronic Disease |
|
| 11/18/2016 |
Jiayin Wang |
|
Managing Data as a Product -- Digging by-products in cancer genomic sequencing data pipelines |
|
| 11/11/2016 |
Xin Geng |
|
An exome-wide sequencing study of lipid response to high-fat meal and fenofibrate in Caucasians: the GOLDN cohorts |
|
| 11/9/2016 |
Degui Zhi |
|
Population Genome Informatics and Precision Cardiovascular Medicine |
|
| 11/4/2016 |
Pora Kim / Guangchun Han |
|
Bioinformatics Analysis of Fusion Genes in Cancer Genomes / Transcriptome analysis of Alzheimer’s disease |
|
| 11/2/2016 |
Peilin Jia |
|
Multi-omics analyses towards understanding of the polygenicity in schizophrenia - Bioinformatics Analysis of Schizophrenia Genes |
|
| 10/28/2016 |
Jennifer “Piper” Below |
|
Functionally oriented association tests in complex traits |
|
| 10/26/2016 |
Zhiguo (Stanley) Yu
Min Jiang |
|
Analyzing Correspondence between MeSH and Topic Model / Using reranking method to improve parser performance on clinical text |
|
| 10/19/2016 |
Kang Lin Hsieh |
|
Developing an algorithm to early identify patients with high risk of T2DM by using EHR |
|
| 10/14/2016 |
Jeffrey Chang |
|
Genomic drug repositioning leads to new targets for breast cancer metastasis |
|
| 10/12/2016 |
Elmer Bernstam |
|
Big [Clinical] Data in Health Care |
|
| 10/5/2016 |
John D'Amore |
|
Striving toward Semantic Interoperability |
|
| 9/28/2016 |
Jiajie Zhang |
|
State of the School |
|
| 9/23/2016 |
Xiaoming Liu |
|
Whole exome and whole genome functional annotation using dbNSFP and WGSA |
|
| 9/21/2016 |
Frank Manion
Scott Malec |
|
An Ontological Representation of the U.S. Common Rule /
Inferring drug-ADE associations from clinical observational data |
|
| 9/16/2016 |
An-Yuan Guo |
|
Transcription factor and miRNA co-regulatory network analysis and its application in complex diseases |
|
| 9/14/2016 |
Yidong Chen |
|
Modeling gene regulation and modulation in cancers |
|
| 9/7/2016 |
Jiang Qian |
|
Tissue- and single cell-specific gene regulation |
|
| 8/31/2016 |
Alan Weiss |
|
Using Problem Lists Across Organizations |
|
| 5/25/16 |
Jiguang Wang |
|
Clonal Evolution in Cancer |
|
| 4/27/16 |
Murthy Devarakonda |
|
Watson Cognitive Computing - Rethinking the Patient Record |
|
| 4/20/16 |
"Tuan" Amith / Chen Liang |
|
Evaluation metrics for biomedical ontologies - Analyzing multifaceted patient safety events - Applying a semiotic evaluation approach for NCBO Bioportal ontologies |
|
| 4/14/16 |
Luca Giancardo |
|
Computational Biomarkers with Imaging and Alternative Data Sources |
|
| 4/13/16 |
Hua Li |
|
Innovative Multi-modality Imaging in Radiation Therapy: From Simulation Optimization to Tumor Response Assessment |
|
| 4/6/16 |
John Frenzel |
|
Behind the Scenes of an Epic install, the MD Anderson Experience |
|
| 3/30/16 |
Clifton David Fuller |
|
Informatics, Imaging, and Radiation Oncology |
|
| 3/24/16 |
David Fulton |
|
Increasing Statewide Electronic Prescribing of Controlled Substances (EPCS) |
|
| 3/16/16 |
John Calhoun |
|
Policy considerations for healthcare informatics tool development |
|
| 3/8/16 |
Lixing Yang |
|
The landscape of Somatic Genome Rearrangements in Human Cancers |
|
| 3/8/16 |
Ramdas Menon,
Jason Phipps |
|
Transforming our Healthcare System with the Aid of Health IT Innovations |
|
| 3/2/16 |
Ken Chen |
|
Computational approaches for advancing cancer genomic medicine |
|
| 2/25/16 |
George R. Gooch |
|
Increasing the size and scope of HIE while also building trust and confidence |
|
| 2/24/16 |
Sahiti Myneni |
|
Towards personalized and data-driven health promotion: role of patient-facing social media and mHealth platforms |
|
| 2/17/16 |
Robert Jenders |
|
Plus Ca Change: Health Information Technology Standards for Clinical Decision Support |
|
| 2/10/16 |
Barbara Berkovich |
|
Use of Registries as a Foundation of the Learning Health System |
|
| 2/3/16 |
James Langabeer |
|
The comparative effectiveness of mobile telehealth technology in prehospital emergency care |
|
| 1/27/16 |
Safa Fathiamini |
|
Automated Identification of Molecular Effects of Drugs (AIMED) |
|
| 1/20/16 |
Kirk Roberts |
|
Natural Language in EHRs: Questions, Answers, & Images |
|
| 1/13/16 |
Hulin Wu |
|
Precision medicine in the Big Data era: a rocket science perspective |
|
| 12/2/15 |
Jiajie Zhang |
|
State of the SBMI |
|
| 11/11/15 |
Jingcheng Du |
|
Post-marketing Vaccine Adverse Events Identification and Individual Differences Analysis |
|
| 11/4/15 |
Jihad Obeid |
|
From 0 to 60 in 5 years...accelerating clinical and translational science through informatics |
|
| 10/28/15 |
Jim Cimino |
|
How do we fix the EHR? |
|
| 10/21/15 |
Min Jiang |
|
Transformation of EHR data to OMOP Common Data Model |
|
| 10/14/15 |
Ajit Appari |
|
Is EHR meaningful use associated with hospital-acquired infections? Results from a national sample of US hospitals |
|
| 10/7/15 |
Barbara Berkovich |
|
Quality Goals for Laboratory Screening: Does 100% Make Sense? |
|
| 10/1/15 |
Xiaobo Zhou |
|
Big Data Sciences for Personalized and Precision Medicine |
|
| 9/30/15 |
Yongqun Oliver He |
|
Ontology development and applications for clinical and biological adverse event data integration and analysis |
|
| 9/18/15 |
Debora Simmons |
|
Healthcare Quality Challenges and How Informatics* (* this means you) Can Save the Day |
|
| 9/16/15 |
Jeremy Warner |
|
Leveraging new and emerging standards to improve the care of oncology patients |
|
| 9/9/15 |
Scott Sittig |
|
Persuasive Technology: Designing Triggers to Impact Behavior |
|
| 9/2/15 |
Kun Huang, PhD |
|
Integration of BIG Biomedical Data in Translational Bioinformatics |
|
| 9/2/15 |
Tiffany Champagne |
|
The evolution of health information exchange |
|
| 8/26/15 |
Goo Jun |
|
Analysis of large-scale next-generation sequencing data for genetics of complex traits |
|
| 7/20/15 |
Mary F. McGuire |
|
Patients (More) Like Me |
|
| 6/23/15 |
Angela Ross |
|
An Outpatient Performance Improvement Project: A Baseline Assessment on Adherence to Pain Standards and Protocols |
|
| 6/5/15 |
|
|
Generating Practice-based Evidence from Electronic Health Records |
|
| 5/15/15 |
Blackford Middleton |
|
The Clinical Decision Support Consortium: A Five Year Retrospective |
|
| 4/29/15 |
Muhammad "Tuan" Amith |
|
Construction and Evaluation of a Vaccine Information Ontology for Patients |
|
| 4/29/15 |
Barbara Berkovich |
|
Use of a Custom Registry for Coumadin Management Across Inpatient and Ambulatory Settings |
|
| 4/27/15 |
Zhiguo "Stanley" Yu |
|
Improving Retrieval of PubMed Articles Using the TopicalMeSH Representation |
|
| 4/27/15 |
Catherine Pepper |
|
Concept Maps versus Mind Map versus Argument Map: Contributions to a Conceptual Analysis of Social Network Analysis |
|
| 4/20/15 |
Chen Liang |
|
Knowledge representation for patient safety reports |
|
| 4/20/15 |
Min Jiang |
|
Semantic Role Labeling of Clinical Text: comparing syntactic parsers and features |
|
| 4/20/15 |
Guergana Savova |
|
Temporal Relation Discovery from the Clinical Narrative |
|
| 4/2/15 |
Mia Markey |
|
3-D Modeling-based Decision Support for Optimizing Quality of Life Following Breast Reconstruction |
|
| 3/18/15 |
Lex Frieden |
|
Tips for Improving NIH Proposals |
|
| 3/11/15 |
Viyod Vydiswaran |
|
Mining High-Quality Health Information from Online Resources: The Role of Big Data Analytics |
|
| 3/4/15 |
Erez Lieberman Aiden |
|
How genomes fold: Now in the loop |
|
| 2/27/15 |
Lam Alex Tsoi |
|
Systems biology approaches to provide inferences and discoveries for high-throughput experiments |
|
| 2/25/15 |
Wei Zhao |
|
Molecular Characterization & Clinical Implementation of Breast Cancer Genomics using Massive Parallel Sequencing & Microarray |
|
| 2/18/15 |
Kirsten Ostherr |
|
From Motion Pictures to Mobile EHRs: Using Technology to Communicate Medical Information |
|
| 2/11/15 |
Sina Madani |
|
Use of Natural Language Processing in Enterprise Terminology Development |
|
| 2/4/15 |
Hadley Wickham |
|
Pipelines for Data Analysis |
|
| 1/28/15 |
Amber Johnson |
|
Informatics Challenges in Personalized Cancer Therapy |
|
| 1/21/15 |
Trudy Millard Krause,
Cecilia Ganduglia Cazaban |
|
Use of Claims Data in Health Services Research |
|
| 1/7/15 |
Kirk Roberts |
|
From EHR Data to Answers: Harnessing Natural Language in Healthcare |
|
| 12/3/14 |
Jiajie Zhang |
|
State of the SBMI |
|
| 11/12/14 |
Kenneth Goodman |
|
Ethics and Health Information Technology: Learning Health Care Systems in a Digital World |
|
| 11/5/14 |
Ivo Nelson |
|
Not for the Faint of Heart…How to Start and Build a Successful Business in Healthcare |
|
| 10/30/14 |
Tyler Caruth |
|
Persuasive Technology to Engage Patients in Chronic Disease Management |
|
| 10/30/14 |
Zhiguo (Stanley) Yu |
|
Correspondence of Topic Models and MeSH Terms for PubMed Abstracts |
|
| 10/22/14 |
Rafeek Yusuf |
|
Human Centered Design in Wound Care Guidelines |
|
| 10/22/14 |
Mehdi Rais |
|
Background & descriptive perspective of TMB disciplinary action data for inadequate medical records |
|
| 10/22/14 |
J. Franck Diaz |
|
Towards a Framework for Standardized, Model-driven Data Quality Assessment for the Secondary Use of Clinical Care Datasets |
|
| 10/15/14 |
Catherine Pepper |
|
Social Network Analysis in Public Health Systems |
|
| 10/15/14 |
Craig Harrington |
|
A Usability Evaluation of a Patient Case Management Prototype |
|
| 10/9/14 |
Robert Murphy |
|
Cloud-enabled Clinical Decision Support (CDS) at Memorial Hermann |
|
| 10/1/14 |
Linda Harrington |
|
Stories From the Front Line of Informatics |
|
| 9/24/14 |
Byron Wallace |
|
Automating Evidence Synthesis |
|
| 9/17/14 |
Carlos Monroy |
|
Using Learning Analytics for Improving Training and Discovery |
|
| 9/10/14 |
Yong Chen |
|
Robust methods for analyzing internet-generated data under biased sampling |
|
| 9/8/14 |
Kai Zheng |
|
Modeling the impact of health information technology on clinical workflow |
|
