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Seminar Archive

All recordings for the current semester are located on the Research Seminars Schedule page.

Date Speaker Topic
12/06/2023 Meera Subash, MD Patient Perceptions of e-Visits: Qualitative Study of Older Adults to Inform Health System Implementation
11/29/2023 Jeremy Hill, DO Research Seminar
11/22/2023 No Seminar THANKSGIVING BREAK
11/15/2023 Two presenters Yanfei Wang - Estimating Individual Treatment Effect for COVID-19 patients
Yan Chu - Machine Learning Model Guided Intensity-Modulated Proton Therapy Plan Optimization for the Mitigation of Radiation-Induced
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11/08/2023 Two presenters Bingyu Mao - A deep-learning-based two-compartment predictive model (PKRNN-2CM) for vancomycin therapeutic drug monitoring
Sheikh Muhammad Saiful Islam - New phenotype discovery method by unsupervised deep
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11/01/2023 Two presenters Yiming Li - Temporal and Spatial Analysis of COVID-19 Vaccines Using Reports from Vaccine Adverse Event Reporting System
Zehan Li - Improving Psychiatry Treatment Responses Prediction with Natural Language
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10/25/2023 Ross Koppel, PhD Cyber Security for Healthcare Records
10/18/2023 Two presenters Morgan Foreman - Improving Patient Activation with Digital Solutions: Supporting Black Pregnant Women with Hypertensive Disorders of Pregnancy
Tongtong Huang - Infer Granger Causality from Pseudo Time-series of Rodent
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10/11/2023 Two presenters Rongbin Li - Large Language Models in Drug Combination Prediction
Dulin Wang - Deep Clustering Models in AD Subtyping
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10/04/2023 Two presenters Xubing Hao - Identification of potential missing concepts in SNOMED CT
Yumeng Yang - Text Classification of Cancer Clinical Trial Eligibility Criteria
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09/27/2023 Two presenters Ishav Desai -Classifying scanned documents using machine learning
Xu Zuo - Extracting Systemic Anti-Cancer and Response Information from the Clinical Notes Following the RECIST Definition
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09/20/2023  Kuldeep Kumar, PhD Some Issues in Classification Problem with Application in Cancer Detection
09/13/2023 Albert Montillo, PhD Bridging the Gap: Harnessing innovations in Deep Learning to provide new insights and prediction capabilities from Complex Biomedical Data
09/06/2023 Heather Lyu, MD Better Data, Better Outcomes: How to Realize the Value of Big Data in Surgical Oncology
08/30/2023 Jeritt Thayer Past, present, and (potential) future of CDS malfunctions
04/26/2023 Jiajie Zhang State of the School
04/19/2023 Yuntao Yang Discover protein structural features of alternative splicing and isoforms using AlphaFold 2
04/12/2023 Peter Killoran, Ryan Walsh Transition to Epic at Memorial Hermann Hospital System
04/05/2023 Zhao Li Recognize Biomedical Knowledge from Publications from Named Entity Recognition to Relation Extraction"
03/29/2023 Eric Bergh Fetal EHR
03/22/2023 Wentao Li Privacy is all you need: privacy and security in Genome-Wide Association Studies
03/15/2023 No Seminar SPRING BREAK
03/08/2023 Yifang Dang Extracting and standardizing social determinants of health factors
03/01/2023 Morgan Foreman Improving Patient Activation with Digital Solutions: Supporting Black Pregnant Women with Hypertensive Disorders
02/22/2023 Yan Chu Forecasting Lymphocytes Depletion during Radiotherapy using Time Series Transformers
02/15/2023 Clifton "Dave" Fuller Imaging, informatics and radiation oncology
02/08/2023 Yanfei Wang / Bingrui Li Scaling up the Bayesian GPLVM to uncover clinical staging / Investigate the composition changes of cells and exosomes in the tumor microenvironment by novel deconvolution approach
02/01/2023 Zhiyu Wan Strategic Privacy-Preserving Sharing of High Dimensional Biomedical Data Enabled by Artificial Intelligence
01/25/2023 Jianping He Applying prompt tuning in biomedical relation extraction
01/18/2023 Michael Jacobs Computational Radiology: A New Frontier in Integrated Medicine with Radiomics, Machine, and Deep Learning
01/11/2023 David Hanauer EMERSE: an easy-to-use, self-service, free-text EHR search engine for cohort identification, chart reviews, and more
12/07/2022 Ying Ding Drug Discovery, PubMed, and Clinical Trial
11/30/2022 Shaun Grannis Leveraging Health Information, Exchange to Support Population Health and Advanced Analytics: The Indiana Experience
11/23/2022 Thanksgiving Break
11/16/2022 Jeritt Thayer Improving Health System Integration by Uncovering Health Data Attributes
11/09/2022 Ivan Coronado /
Yuntao Yang
Proxy Analysis of Neural Vascular System using Retina Imaging and Deep Neural Networks / AlphaFold 2: applications and deployment in an HPC environment
11/02/2022 Xiaoxuan Cai Causal inference for multivariate time series in the application of mobile health
10/26/2022 Jingqi Wang /
Nina Smith
Medical concept normalization using transformers - from string similarity to semantic similarity / Qualitative Research Methods to Study Unintended Consequences of Health Information Technology Policy
10/19/2022 Pora Kim FusionPDB: Fusion Protein Annotation Database
10/11/2022 Charles Friedman 10/11 (At SBMI) and 10/12 (at Dental School) Chuck Friedman
10/05/2022 Hussein Abbas Dissecting Acute Myeloid Leukemia and its Microenvironment, One Cell at a Time
09/28/2022 Todd Johnson Causal inference from observational data
09/21/2022 Josh Lin Data leakage due to care provided outside of the study electronic health record system: potential biases and solutions
09/14/2022 Zachary Siegel In a world of Stigma, Can a Computer Algorithm Really Predict Overdose Risk?
09/07/2022 Russ Waitman/GPC PCORNet GPC
08/31/2022 Stephen Wu Honor Ethics: The Challenge of Globalizing Value Alignment in AI Ethics
04/27/2022 Jiajie Zhang State of the School
04/20/2022 Alexandra Zingg Guzman Towards Digital Health Interventions for Perinatal Mental Health Promotion: Lessons Learned from Social Media Listening
04/13/2022 Chunhua Weng Natural Language Cohort Query at the intersection of AI and HCI
04/06/2022 Carlos Perez Aldana Social Network Analysis of Online Support Communities for Adolescent and Young Adult Cancer Survivors
03/30/2022 Bingrui Li Investigate the composition changes of tumor microenvironment in various cancers by novel deconvolution approach
03/23/2022 Sarah May Using Data Science Methods to Facilitate HIV Prevention
03/16/2022 Spring Break
03/09/2022 Zhao Li / Xu Zuo Data bias and the performance of deep learning for predicting HCC development among NAFLD patients / An informatics framework for representing, detecting and measuring citations of biomedical datasets
03/02/2022 Alex Turchin Using EHR Data for Clinical Research
02/23/2022 Karthik Adapa TBA
02/16/2022 Wejnin (Jim) Zheng Data Science and Informatics Core for Cancer Research (DSICCR): Resources, Expertise and Services
02/09/2022 Griffin Weber Leveraging electronic health records across multiple institutions for research
02/02/2022 Yandong Jiang AI and Anesthesia: how quickly is the field moving forwards?
01/26/2022 Hussein Abbas Investigating Acute Myeloid Leukemia: From Clinical Studies to Multi-Omic Single Cell Profiling
01/19/2022 Yu-Chiao (Chris) Chiu Deep learning for predicting the response to chemical and genetic perturbations of cancer
01/12/2022 Xia Ning Ranking-based Artificial Intelligence: from clinical decision support to precision medicine
12/08/2021 Neil Abernathy How informatics accelerated the COVID-19 vaccine clinical trials
12/01/2021 Zak Kohane Learning how to unravel complex disease using phenome-wide scans + genomics: Autism Case History
11/24/2021 Thanksgiving Break
11/17/2021 Jingqi Wang / Xinyuan Zhang Medical concept normalization on clinical text / Computer-Aided Supporting Algorithm for Skin Diseases Diagnosis
11/10/2021 Sarah May Predicting risk of HIV infection using EHR data
11/03/2021 Yanfei Wang Approach to characterize disease progression
10/27/2021 Yuqi Si Deep Representation Learning to Enhance Clinical Narrative Understanding
10/20/2021 Tongtong Huang / Ivan Coronado Drug adverse event prediction using knowledge graph / Towards Stroke Biomarkers on Fundus Retinal Imaging
10/13/2021 Pora Kim FusionGDB 2.0, fusion gene annotation update aided by deep learning
10/06/2021 Ang Li Optimizing Cancer Associated Thrombosis Research through Clinical Informatics & EpidemiologyD
09/29/2021 Laila Bekhet Towards implementable deep learning based predictive models
09/22/2021 Jia Zeng Utilizing Informatics in Precision Oncology Decision Support
09/15/2021 Christoph Lehmann International Status of Medical Informatics
09/08/2021 Sahiti Myneni Towards sustainable digital health ecosystem: convergence of social computing, mHealth and human factors
09/01/2021 Robert Murphy UT Health Intelligence Platform (UT-HIP)
04/28/2021 Jiajie Zhang State of the School
04/21/2021 Alexandra Zingg / Tavleen Singh Formulating Digital Health Technologies for Peripartum Depression Management: A Mixed Methods Inquiry / A qualitative inquiry of speech acts in health-related online peer interaction
04/14/2021 Yi-Ching Tang Predicting Drug Response and Synergy Using Deep Learning Models
04/07/2021 Roni Matin Anchoring Bias in Clinical Decision-Making Involving Transitions of Care in the Emergency Department: Identification and Evaluation of Risk Factors
03/31/2021 Nina Smith Unintended consequences of HIT policy: The case of the Texas prescription drug monitoring program
03/24/2021 Sarvesh Soni Questioning and Answering from Electronic Health Records
03/17/2021 Spring Break - No Seminar
03/10/2021 Jian Tang Graph representation learning for drug discovery
03/03/2021 Laila Bekhet / Xiao Dong Comprehensive characterization of COVID-19 patients with test re-positivity in a large EHR system across the US
02/24/2021 Linda Li Predictive algorithm for forecasting laboratory values
02/17/2021 Babatope Fatuyi TBD
02/10/2021 Gretchen Purcell Jackson A Framework for Evaluation of AI in Healthcare
02/03/2021 Dina Demner-Fushman Deciphering consumers' health-related questions (including COVID-19) and finding reliable answers
01/27/2021 Sunil Sheth Machine learning in Clinical Practice: Applications in Acute Stroke
01/20/2021 Dean Sittig A Sociotechnical Framework for Safety-related EHR Research Reporting: The SAFER Reporting Framework
01/13/2021 Luca Giancardo Introduction to Fully Convolutional Neural Networks for Medical Imaging
12/09/2020 Surabhi Datta/Jingqi Wang Spatial Information Extraction from Radiology Reports / Concept Normalization for Biomedical Text
12/02/2020 Sarvesh Soni/ Roni Matin Question Answering from Electronic Health Records / Identifying the Risks for Anchoring Bias during Emergency Department Transitions of Care
11/25/2020   Thanksgiving Break
11/18/2020 Xinyuan Zhang Ontological Computer-aided Diagnosis for Skin Diseases
11/18/2020 Xiao Dong COVID-19 TestNorm - A Tool to Normalize COVID-19 Testing Names to LOINC Codes
11/11/2020 Amy Franklin, et al. COVID-19 Panel
11/04/2020 Yi-Ching Tang Explainable Drug Sensitivity Prediction through Cancer Pathway Enrichment Scores
10/28/2020 Rebecca Lunstroth / Susan Fenton AI Ethics
10/21/2020 Maryam Garza Determining the Utility of HL7® Fast Healthcare Interoperability Resources (FHIR®) Standards in Supporting EHR and EDC-agnostic eSource Implementations for Clinical Research
10/14/2020 Harold Thimbleby Digital Theater / Calling out seductive digital systems that don't work when they hit reality
10/07/2020 Yuqi Si Patient Representation Learning to Enhance Clinical Decision Support
09/30/2020 Mary Boland Developing Informatics Methods to Study Maternal and Child Health Outcomes and their Environmental Contributions
09/23/2020 Harold Lehmann Data and Software Quality in the National COVID Cohort Collaborative
09/16/2020 Laila Gindy Bekhet Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease prediction
09/09/2020 Hashim Al-Mubaid Gene mutation disease relationship and functional characterization with computational methods
09/02/2020 James Lewis Perceived Usability: Usefulness and measurement
04/22/2020 Maryam Garza HL7 Fast Healthcare Interoperability Resources (FHIR):Standardized Health Information Exchange for Streamlining Data Collection in Multi-Site Clinical Research Studies
04/15/2020 Jiajie Zhang State of the School
04/08/2020 Carlos Perez-Aldana/Laila Gindy Bekhet Social Network Analysis of Online Communities for Adolescent and Young Adult Cancer Survivors
04/01/2020 Yuqi Si/Surabhi Datta Patient Representation Learning from EHRs: Challenges and Methods
03/25/2020 Wei Zhang Mathematical network approaches enhance understanding of brain architecture of pediatric epilepsy *Note: Audio Issues Prevented Recording*
03/18/2020 SPRING BREAK
03/11/2020 Muhammad Amith An ontology driven dialogue manager for supporting HPV vaccine counseling
03/04/2020 GQ Zhang Clinical Research Informatics in Action: a Data Science Perspective
02/26/2020 Sarah May Developing Models to Predict Risk of HIV Infection Using Electronic Health Record Data
02/19/2020 Thomas Deserno Accident and emergency informatics
02/12/2020 Licong Cui Finding Needles in a Haystack: Debugging Large Biomedical Ontologies to Identify Hierarchical Defects
02/05/2020 Tim Miller Clinical Natural Language Processing with Machine Learning
01/29/2020 Michael Smolensky Biological Time: Often Neglected Variable in Bioinformatics
01/22/2020 Elmer V. Bernstam Precision oncology from an informatics perspective
01/15/2020 Health Goodrum Automatic Classification of Scanned Electronic Health Record Documents
01/08/2020 Peter Hanik On the Nature of Problems and Solutions
12/04/2019 Roni Matin Identifying Risk Factors for Anchoring Bias for Clinical Diagnoses Involving ED Sign-Outs
11/27/2019 No Seminar - Thanksgiving Week
11/20/2019 Alexandra Zingg Guzman Digital Health Systems in Maternal Mental Health: A Qualitative Assessment of Patient Needs and Views
11/13/2019 Fatima Merchant Computational modeling tools to facilitate shared decision making in breast reconstruction surgery
11/06/2019 Carlos Perez Aldana Harnessing Online Social Networks for Interventions Targeting Adolescent and Young Adult (AYA) Cancer Survivors
10/30/2019 Leslie Lenert Desiderata for a Learning Health System
10/23/2019 Thamar Solorio Named Entity Recognition in Challenging Scenarios
10/16/2019 Nina Smith The US Opioid Crisis and Prescription Drug Monitoring: Biomedical Informatics Research Needs
10/02/2019 Maryam Garza Evaluating the Coverage of the HL7 FHIR Standard to Support eSource Data Exchange Implementations for use in Multi-Site Clinical Research Studies
09/25/2019 Steve Jones (tentative) TBA
09/18/2019 Lance Black TMC Innovation
09/11/2019 Xiao Dong Detecting Cancer Preventive Effects of Non-Cancer Drugs Using Real World Data
09/04/2019 Todd Johnson Causal reasoning in biomedicine
08/28/2019 Lukas Simon Longitudinal analysis of lung regeneration at cellular resolution
05/01/2019 Todd J. Treangen The Promise and Perils of Microbial Forensics in the Genomics Era
04/24/2019 Qiang Wei/Jingcheng Du/Xinyuan Zhang Understanding Health Beliefs regarding HPV vaccine from Twitter / A Study of Deep Learning Approaches for Medication and Adverse Drug Event Extraction from Clinical Text / Automatic Computer-Aided Diagnosis Algorithm for Skin Disease Images
04/17/2019 Henry Jones Bioinformatics Utilization Of (And Dependence On) Information Technologies: Understanding, Managing, and Risk-Mitigating The Contracting, Intellectual Property, and Other Legal Aspects Of Your Chosen Career Path
04/10/2019 Navin Varadarajan Advancing cancer immunotherapy one cell at a time
04/03/2019 Jiajie Zhang State of the School
03/06/2019 Pat McGinnis Informatics as a tool for Health Insurance
02/27/2019 Andrew Routh Nanopore sequencing and ClickSeq to characterize viral RNA recombination, mRNA splicing, and polyadenylation
02/27/2019 Xia (Ben) Hu Human-Centric Machine Learning
02/20/2019 Spring Break - No Seminar
02/20/2019 Anirban Maitra Why is Pancreatic Cancer So Hard to Treat and What Can We Do About It?
02/13/2019 Salavat Aglyamov Dynamic optical coherence elastography for various biomedical applications
02/13/2019 Deevakar Rogith Computational ethnography: learning from EHR log data
02/06/2019 Jose-Miguel Yamal Extensions of Statistical and Machine Learning Methods for Classification of Objects Based on Measurements of Embedded Observations within Each Object
01/30/2019 David Mayerich Building High-Throughput Three-Dimensional Models of Tissue at the Cellular Level
01/16/2019 Guoning Chen Examples of Graph-based Scientific Data Processing and Geometry Processing
12/05/2018 Jiajie Zhang   State of the School
11/28/2018 Yejin Kim Tensor Factorization for Computational Phenotyping
11/21/2018 Thanksgiving Week
11/14/2018 Muhammad Amith Applications of Semantics and Knowledge Representation for Public Health Informatics Research
11/07/2018 Philip W Bradley HIMSS Analytics – Maturity Model Benefits
10/31/2018 Xiaoqian Jiang Calibrating Predictive Models for Clinical Decision Making - Distributed data analysis
10/24/2018 Pora Kim FusionGDB: A Reference Resource of Functional Annotation of Human Fusion Genes
10/17/2018 Akdes Harmanci Identifying Cancer Biomarkers using Integrative Analysis of Single Cell and Bulk Sequencing Data
10/10/2018 Miran Kim Homomorphic Encryption for Protecting Genomic Privacy
10/3/2018 W. Jim Zheng Promote Data Driven Research
09/26/2018 Licong Cui Ontology Quality Assurance for Biomedical Data Science and Applications
09/19/2018 Amelio Telenti The data of 150,000 human genomes
09/12/2018 Ying Lin Large-Scale Personalized Health Surveillance by Collaborative Learning and Selective Sensing
09/05/2018 Kang Hsieh (With Avi Raju, Bin Yao, Adeola Akinfaderin) Fraud Detection using Clustering Techniques, SBMIners win the MITRE Healthcare Anti-Fraud Academic Competition
08/29/2018 Stephen Wu Patient Level Search in EHR Text
05/06/2018 No Seminar Finals Week
04/29/2018 Muhammad Amith / Barbara Berkovich Construction and Evaluation of a Vaccine Information Ontology for Patients / Use of a Custom Registry for Coumadin Management Across Inpatient and Ambulatory Settings
04/22/2018 Stanley Yu / Katherine Pepper Improving Retrieval of PubMed Articles Using the TopicalMeSH Representation / Concept Map versus Mind Map: Contributions to a Conceptual Analysis of Social Network Analysis
04/15/2018 Chen Liang / Min Jiang Knowledge representation for patient safety reports / Semantic Role Labeling of Clinical Text: comparing syntactic parsers and features
04/08/2018 Guergana Savova Temporal Relation Discovery from the Clinical Narrative
04/01/2018 Mia Markey 3-D Modeling-based Decision Support for Optimizing Quality of Life following Breast Reconstruction
03/18/2018 Lex Frieden Tips for Improving NIH Proposals
03/11/2018 Vinod Vydiswaran Mining High-Qualtiy Health Information from Online Resources: The Role of Big Data Analytics
03/07/2018 Joonha Chang Towards Intoxication Detection via non-invasive Natural Typing
03/04/2018 Erez Lieberman Aiden How genomes fold: Now in the loop
02/25/2018 Wei Zhao Molecular Characterization and Clinical implementation of Breast Cancer Genomics Using Massive Parallel Sequencing and Microarray
02/18/2018 Kirsten Ostherr From Motion Pictures to Mobile EHRs: Using Technology to Communicate Medical Information
02/11/2018 Sina Madani Use of Natural Language Processing in Enterprise Terminology Development
02/04/2018 Hadley Wickham Pipelines for Data Analysis
01/28/2018 Amber Johnson Information challenges in personalized cancer therapy
12/6/2017 Carl Vartian Risks, Benefits and Safety of Hospital EHRs 
11/29/2017 Peter Killoran  Implementation of an Anesthesia Information Management System – Lessons learned
11/15/2017 Kenna Shaw Precision Cancer Medicine: Neither Silver Bullet Nor a Dream Illusion
11/8/2017 Xiaobo Zhou Computational Systems Medicine: Look forward 
11/1/2017 Qiang Wei Reduction of annotation time for biomedical concepts extraction in practice
10/25/2017 Nadir Weibel Sensing, Understanding, Intervening: Human-Centered and Ubiquitous Computing for Health
10/18/2017 Safa Fathiamini Relational vs. Attributional Similarity as a Basis for the Identification of Drug-Gene Relationships
10/11/2017 Henry Wang Prehospital Endotracheal Intubation: Leveraging Large Data to Advance Acute Care
10/4/2017 Nick Navin Delineating Tumor Evolution with Single Cell Genomics
9/27/2017 Hua Xu Toward portable NLP solutions for healthcare – the journey of CLAMP 
9/20/2017 Wendy Chapman NLP Out of the Box: How Close Are We? - Healthcare Transformation Needs NLP
9/13/2017 William Paiva Transforming health care with health data analytics and predictive medicine - Center for Health Systems Innovation
9/6/2017 Assaf Gottlieb Clinical and genetic-based patient profiles help compare and predict drug effects - Estimating effects of 2nd line therapy for T2DM using EHRs
4/26/2017 Jiajie Zhang State of the School 
4/19/2017 Jun Li  Clinical Trial Management System and Its Interoperability 
4/12/2017 Frank Manion  Ontology Engineering: Soliciting and Validating Knowledge From Domain Experts
4/5/2017 Mark Weiner  Clinical Data Analytics Idiosyncrasies - Truth versus Truthiness in Clinical Data  
3/22/2017 Jingcheng Du Understanding Twitter contents on vaccinations using multiple machine learning based approaches
3/8/2017 Qiang Wei  Cost Model based Active Learning for Named  Entity Recognition in Clinical Text 
3/1/2017 Devika Subramanian  Computational Thinking
2/15/2017 Luca Giancardo  Detection of Motor Decline in Early Parkinson's Disease by Interaction with Digital Devices
2/8/2017 Joydeep Ghosh  Eliciting Actionable Insights from Complex Medical Data 
2/1/2017 Scott Malec Using Background Knowledge to Tame Clinical Observational Data, a Use Case in Pharmacovigilance
1/25/2017 Hardeep Singh Improving Diagnosis in the EHR Era
1/18/2017 Marc Overhage Instrumenting and learning from the patient, provider, system interaction
1/11/2017 Genevera Allen  Mixed Graphical Models with Applications to Integrative Cancer Genomics
12/2/2016 Janet Wojcicki Leukocyte Telomere Length as Predictor of Metabolic Disease in Latinos
11/30/2016 Scott Sittig capABILITY: A mHealth solution for Chronic Disease
11/18/2016 Jiayin Wang Managing Data as a Product -- Digging by-products in cancer genomic sequencing data pipelines
11/11/2016 Xin Geng An exome-wide sequencing study of lipid response to high-fat meal and fenofibrate in Caucasians: the GOLDN cohorts
11/9/2016 Degui Zhi Population Genome Informatics and Precision Cardiovascular Medicine
11/4/2016 Pora Kim / Guangchun Han Bioinformatics Analysis of Fusion Genes in Cancer Genomes / Transcriptome analysis of Alzheimer’s disease
11/2/2016 Peilin Jia Multi-omics analyses towards understanding of the polygenicity in schizophrenia - Bioinformatics Analysis of Schizophrenia Genes
10/28/2016 Jennifer “Piper” Below Functionally oriented association tests in complex traits
10/26/2016 Zhiguo (Stanley) Yu
Min Jiang
Analyzing Correspondence between MeSH and Topic Model / Using reranking method to improve parser performance on clinical text 
10/19/2016 Kang Lin Hsieh Developing an algorithm to early identify patients with high risk of T2DM by using EHR
10/14/2016 Jeffrey Chang Genomic drug repositioning leads to new targets for breast cancer metastasis
10/12/2016 Elmer Bernstam  Big [Clinical] Data in Health Care
10/5/2016 John D'Amore Striving toward Semantic Interoperability
9/28/2016 Jiajie Zhang State of the School
9/23/2016 Xiaoming Liu Whole exome and whole genome functional annotation using dbNSFP and WGSA
9/21/2016 Frank Manion
Scott Malec
An Ontological Representation of the U.S. Common Rule /
Inferring drug-ADE associations from clinical observational data
9/16/2016 An-Yuan Guo Transcription factor and miRNA co-regulatory network analysis and its application in complex diseases
9/14/2016 Yidong Chen Modeling gene regulation and modulation in cancers
9/7/2016 Jiang Qian Tissue- and single cell-specific gene regulation
8/31/2016 Alan Weiss Using Problem Lists Across Organizations
5/25/16 Jiguang Wang Clonal Evolution in Cancer
4/27/16 Murthy Devarakonda Watson Cognitive Computing - Rethinking the Patient Record
4/20/16 "Tuan" Amith / Chen Liang Evaluation metrics for biomedical ontologies - Analyzing multifaceted patient safety events - Applying a semiotic evaluation approach for NCBO Bioportal ontologies
4/14/16 Luca Giancardo Computational Biomarkers with Imaging and Alternative Data Sources
4/13/16 Hua Li Innovative Multi-modality Imaging in Radiation Therapy: From Simulation Optimization to Tumor Response Assessment
4/6/16 John Frenzel Behind the Scenes of an Epic install, the MD Anderson Experience
3/30/16 Clifton David Fuller Informatics, Imaging, and Radiation Oncology
3/24/16 David Fulton Increasing Statewide Electronic Prescribing of Controlled Substances (EPCS)
3/16/16 John Calhoun Policy considerations for healthcare informatics tool development
3/8/16 Lixing Yang  The landscape of Somatic Genome Rearrangements in Human Cancers
3/8/16 Ramdas Menon,
Jason Phipps
Transforming our Healthcare System with the Aid of Health IT Innovations
3/2/16 Ken Chen Computational approaches for advancing cancer genomic medicine
2/25/16 George R. Gooch Increasing the size and scope of HIE while also building trust and confidence
2/24/16 Sahiti Myneni Towards personalized and data-driven health promotion: role of patient-facing social media and mHealth platforms
2/17/16 Robert Jenders Plus Ca Change: Health Information Technology Standards for Clinical Decision Support 
2/10/16 Barbara Berkovich Use of Registries as a Foundation of the Learning Health System
2/3/16 James Langabeer The comparative effectiveness of mobile telehealth technology in prehospital emergency care
1/27/16 Safa Fathiamini Automated Identification of Molecular Effects of Drugs (AIMED)
1/20/16 Kirk Roberts Natural Language in EHRs: Questions, Answers, & Images
1/13/16 Hulin Wu Precision medicine in the Big Data era: a rocket science perspective
12/2/15 Jiajie Zhang State of the SBMI
11/11/15 Jingcheng Du Post-marketing Vaccine Adverse Events Identification and Individual Differences Analysis
11/4/15 Jihad Obeid From 0 to 60 in 5 years...accelerating clinical and translational science through informatics
10/28/15 Jim Cimino How do we fix the EHR?
10/21/15 Min Jiang Transformation of EHR data to OMOP Common Data Model
10/14/15 Ajit Appari Is EHR meaningful use associated with hospital-acquired infections? Results from a national sample of US hospitals
10/7/15 Barbara Berkovich Quality Goals for Laboratory Screening: Does 100% Make Sense?
10/1/15 Xiaobo Zhou Big Data Sciences for Personalized and Precision Medicine
9/30/15 Yongqun Oliver He Ontology development and applications for clinical and biological adverse event data integration and analysis
9/18/15 Debora Simmons Healthcare Quality Challenges and How Informatics* (* this means you) Can Save the Day
9/16/15 Jeremy Warner Leveraging new and emerging standards to improve the care of oncology patients
9/9/15 Scott Sittig Persuasive Technology: Designing Triggers to Impact Behavior
9/2/15 Kun Huang, PhD Integration of BIG Biomedical Data in Translational Bioinformatics
9/2/15 Tiffany Champagne The evolution of health information exchange
8/26/15 Goo Jun Analysis of large-scale next-generation sequencing data for genetics of complex traits
7/20/15 Mary F. McGuire Patients (More) Like Me
6/23/15 Angela Ross An Outpatient Performance Improvement Project: A Baseline Assessment on Adherence to Pain Standards and Protocols
6/5/15 Generating Practice-based Evidence from Electronic Health Records
5/15/15 Blackford Middleton The Clinical Decision Support Consortium: A Five Year Retrospective
4/29/15 Muhammad "Tuan" Amith Construction and Evaluation of a Vaccine Information Ontology for Patients
4/29/15 Barbara Berkovich Use of a Custom Registry for Coumadin Management Across Inpatient and Ambulatory Settings
4/27/15 Zhiguo "Stanley" Yu Improving Retrieval of PubMed Articles Using the TopicalMeSH Representation
4/27/15 Catherine Pepper Concept Maps versus Mind Map versus Argument Map: Contributions to a Conceptual Analysis of Social Network Analysis
4/20/15 Chen Liang Knowledge representation for patient safety reports
4/20/15 Min Jiang Semantic Role Labeling of Clinical Text: comparing syntactic parsers and features
4/20/15 Guergana Savova Temporal Relation Discovery from the Clinical Narrative
4/2/15 Mia Markey 3-D Modeling-based Decision Support for Optimizing Quality of Life Following Breast Reconstruction
3/18/15 Lex Frieden Tips for Improving NIH Proposals
3/11/15 Viyod Vydiswaran Mining High-Quality Health Information from Online Resources: The Role of Big Data Analytics
3/4/15 Erez Lieberman Aiden How genomes fold: Now in the loop
2/27/15 Lam Alex Tsoi Systems biology approaches to provide inferences and discoveries for high-throughput experiments
2/25/15 Wei Zhao Molecular Characterization & Clinical Implementation of Breast Cancer Genomics using Massive Parallel Sequencing & Microarray
2/18/15 Kirsten Ostherr From Motion Pictures to Mobile EHRs: Using Technology to Communicate Medical Information
2/11/15 Sina Madani Use of Natural Language Processing in Enterprise Terminology Development
2/4/15 Hadley Wickham Pipelines for Data Analysis
1/28/15 Amber Johnson Informatics Challenges in Personalized Cancer Therapy
1/21/15 Trudy Millard Krause,
Cecilia Ganduglia Cazaban
Use of Claims Data in Health Services Research
1/7/15 Kirk Roberts From EHR Data to Answers: Harnessing Natural Language in Healthcare
12/3/14 Jiajie Zhang State of the SBMI
11/12/14 Kenneth Goodman Ethics and Health Information Technology: Learning Health Care Systems in a Digital World
11/5/14 Ivo Nelson Not for the Faint of Heart…How to Start and Build a Successful Business in Healthcare
10/30/14 Tyler Caruth Persuasive Technology to Engage Patients in Chronic Disease Management
10/30/14 Zhiguo (Stanley) Yu Correspondence of Topic Models and MeSH Terms for PubMed Abstracts
10/22/14 Rafeek Yusuf Human Centered Design in Wound Care Guidelines
10/22/14 Mehdi Rais Background & descriptive perspective of TMB disciplinary action data for inadequate medical records
10/22/14 J. Franck Diaz Towards a Framework for Standardized, Model-driven Data Quality Assessment for the Secondary Use of Clinical Care Datasets
10/15/14 Catherine Pepper Social Network Analysis in Public Health Systems
10/15/14 Craig Harrington A Usability Evaluation of a Patient Case Management Prototype
10/9/14 Robert Murphy Cloud-enabled Clinical Decision Support (CDS) at Memorial Hermann
10/1/14 Linda Harrington Stories From the Front Line of Informatics
9/24/14 Byron Wallace Automating Evidence Synthesis
9/17/14 Carlos Monroy Using Learning Analytics for Improving Training and Discovery
9/10/14 Yong Chen Robust methods for analyzing internet-generated data under biased sampling
9/8/14 Kai Zheng Modeling the impact of health information technology on clinical workflow